Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLSPNClaspin. (1195 aa)    
Predicted Functional Partners:
chek1
Checkpoint kinase 1; Belongs to the protein kinase superfamily.
   
 0.998
cdc45
CDC45 cell division cycle 45 homolog (S. cerevisiae).
   
 0.993
topbp1
DNA topoisomerase II binding protein 1.
   
 0.992
rpa3
Replication protein A3.
    
 0.990
ENSPFOP00000008634
Timeless circadian clock.
   
 0.986
primpol
Primase and polymerase (DNA-directed).
   
 
 0.985
ENSPFOP00000017291
Cell division cycle 7 homolog (S. cerevisiae); Belongs to the protein kinase superfamily.
   
 0.985
brca1
Uncharacterized protein.
   
 0.980
tipin
TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
   
 0.977
gins3
GINS complex subunit 3.
   
 
 0.976
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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