Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cmtr1Cap methyltransferase 1. (828 aa)    
Predicted Functional Partners:
DHX15
DEAH-box helicase 15.
   
 
 0.971
rngtt
Polynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus.
    
 
 0.926
ENSPFOP00000001088
DEAH (Asp-Glu-Ala-His) box helicase 15.
   
 
 0.873
LOC103146748
Uncharacterized protein.
      
 0.686
nxn
Thioredoxin domain-containing protein.
   
  
 0.665
ust
Uronyl 2-sulfotransferase a.
      
 0.659
trmt44
tRNA methyltransferase 44 homolog.
      
 0.652
supt7l
SPT7 like, STAGA complex gamma subunit.
      
 0.640
SYDE2
Synapse defective Rho GTPase homolog 2.
      
 0.636
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
      
 0.635
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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