Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
stk26Serine/threonine protein kinase 26. (402 aa)    
Predicted Functional Partners:
pdcd10
Programmed cell death 10b.
   
 
 0.883
lrsam1
Leucine rich repeat and sterile alpha motif containing 1.
   
 
 0.841
strip1
Striatin interacting protein 1.
    
 
 0.810
LOC103156730
MOB family member 4, phocein.
    
 
 0.796
ENSPFOP00000009871
Striatin, calmodulin binding protein.
    
 
 0.791
STRN
Striatin.
    
 
 0.791
slmap
Sarcolemma associated protein a.
    
 
 0.777
cab39
Calcium binding protein 39.
   
 
 0.775
LOC103151072
Uncharacterized protein.
    
 
 0.757
ENSPFOP00000001543
RHO family interacting cell polarization regulator 1.
    
 
 0.756
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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