Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
abtb2Ankyrin repeat and BTB (POZ) domain containing 2b. (1049 aa)    
Predicted Functional Partners:
ENSPFOP00000009388
UBX domain protein 7.
    
 0.626
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.608
ENSPFOP00000010423
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.608
ENSPFOP00000018355
Bardet-Biedl syndrome 9.
    
 0.587
RELL1
RELT like 1.
      
 0.565
ttc8
Tetratricopeptide repeat domain 8.
    
 0.562
bbs7
Bardet-Biedl syndrome 7.
    
 0.555
ENSPFOP00000005086
BBSome interacting protein 1.
    
  0.508
ric8b
RIC8 guanine nucleotide exchange factor B.
      
 0.508
itfg1
Integrin alpha FG-GAP repeat containing 1.
      
 0.498
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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