Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENSPFOP00000001729Kelch repeat and BTB (POZ) domain containing 3. (614 aa)    
Predicted Functional Partners:
alkbh8
AlkB homolog 8, tRNA methyltransferase.
      
 0.726
gabra6
Gamma-aminobutyric acid (GABA) A receptor, alpha 6b; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.714
srm
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
      
 0.712
ENSPFOP00000003824
Ubiquinol-cytochrome c reductase core protein 1.
      
 0.711
ndufs2
NADH:ubiquinone oxidoreductase core subunit S2; Belongs to the complex I 49 kDa subunit family.
      
 0.711
ENSPFOP00000018326
Charged multivesicular body protein 2A.
      
 0.710
UQCRFS1
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
      
 0.642
LOC103149177
Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1.
      
 0.642
ENSPFOP00000009388
UBX domain protein 7.
    
  0.616
LOC103149308
Gamma-aminobutyric acid (GABA) A receptor, subunit alpha 4; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.604
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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