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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001741Tumor necrosis factor receptor superfamily, member 11b. (278 aa)    
Predicted Functional Partners:
LOC103140155
CD40 ligand; Belongs to the tumor necrosis factor family.
   
 0.931
faslg
Fas ligand (TNF superfamily, member 6); Belongs to the tumor necrosis factor family.
    
  0.858
tnfsf11
TNF superfamily member 11; Belongs to the tumor necrosis factor family.
    
 0.849
LOC103154153
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
    
 0.833
ENSPFOP00000004533
TNF superfamily member 14; Belongs to the tumor necrosis factor family.
   
 
  0.822
LOC103154654
Tumor necrosis factor b (TNF superfamily, member 2).
   
 0.798
btla
Ig-like domain-containing protein.
   
 0.770
ENSPFOP00000012411
Tumor necrosis factor a (TNF superfamily, member 2); Belongs to the tumor necrosis factor family.
  
 0.762
tnfrsf11a
Tumor necrosis factor receptor superfamily, member 11a, NFKB activator.
   
 0.616
traf7
TNF receptor-associated factor 7.
    
 0.595
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.