Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001741Tumor necrosis factor receptor superfamily, member 11b. (278 aa)    
Predicted Functional Partners:
LOC103140155
CD40 ligand; Belongs to the tumor necrosis factor family.
    
 0.968
LOC103154153
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
    
 0.967
faslg
Fas ligand (TNF superfamily, member 6); Belongs to the tumor necrosis factor family.
    
  0.908
ENSPFOP00000004533
TNF superfamily member 14; Belongs to the tumor necrosis factor family.
     
  0.906
ENSPFOP00000008496
TNFR-Cys domain-containing protein.
  
  
 
0.906
LOC103149726
Uncharacterized protein.
  
  
 
0.901
tnfsf11
TNF superfamily member 11; Belongs to the tumor necrosis factor family.
    
 0.767
ENSPFOP00000012411
Tumor necrosis factor a (TNF superfamily, member 2); Belongs to the tumor necrosis factor family.
  
 
 0.690
LOC103154654
Tumor necrosis factor b (TNF superfamily, member 2).
   
 0.684
btla
Ig-like domain-containing protein.
    
 0.630
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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