Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rnf31Ring finger protein 31. (1111 aa)    
Predicted Functional Partners:
ENSPFOP00000015291
SHANK-associated RH domain interacting protein.
    
 0.998
rbck1
RanBP-type and C3HC4-type zinc finger containing 1.
   
 0.996
LOC103135233
Sharpin and rbck1 related.
   
 0.996
ENSPFOP00000015630
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
   
 0.991
birc2
Baculoviral IAP repeat containing 2.
    
 0.985
LOC103139935
X-linked inhibitor of apoptosis.
    
 0.978
OTULIN
OTU deubiquitinase with linear linkage specificity.
    
 0.978
LOC103154502
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.977
ENSPFOP00000003085
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.977
traf2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.977
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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