close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001753SECA_MOTOR_DEAD domain-containing protein. (1024 aa)    
Predicted Functional Partners:
ENSPFOP00000006865
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).
   
 0.822
paf1
PAF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.799
ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.765
ENSPFOP00000018781
Cyclin-dependent kinase 2 interacting protein.
    
 0.765
ENSPFOP00000011898
RTF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.676
ENSPFOP00000004198
Baculoviral IAP repeat containing 6.
    
 0.623
LOC103153758
Uncharacterized protein.
   
 0.610
dab2
DAB adaptor protein 2.
   
 0.610
ENSPFOP00000011439
DAB adaptor protein 1b.
   
 0.610
ENSPFOP00000011851
Complement component 8, beta polypeptide.
   
 0.610
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.