STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cul2Cullin 2; Belongs to the cullin family. (745 aa)    
Predicted Functional Partners:
ENSPFOP00000009388
UBX domain protein 7.
    
 0.999
eloc
Elongin C paralog a; Belongs to the SKP1 family.
   
 0.999
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.999
LOC103143209
Von Hippel-Lindau tumor suppressor.
    
 0.990
LOC103138412
NEDD8 ubiquitin like modifier, like.
    
 0.989
lrr1
Zgc:77287.
    
 0.988
ENSPFOP00000011652
Ring finger protein 7.
    
 0.981
cops2
COP9 signalosome subunit 2.
   
  0.980
cops5
COP9 signalosome subunit 5.
   
 0.979
ELOB
Elongin B.
    
 0.979
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.