Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC103138585Heme binding protein 2. (192 aa)    
Predicted Functional Partners:
pdcd6
Programmed cell death 6.
    
   0.790
pef1
Penta-EF-hand domain containing 1.
    
   0.790
lrpprc
Leucine-rich pentatricopeptide repeat containing.
    
 
 0.667
cecr2
Bromo domain-containing protein.
      
 0.564
LOC103144227
Inhibitor of DNA binding 3.
   
    0.514
ENSPFOP00000023063
Uncharacterized protein.
      
 0.504
zfyve21
Zinc finger, FYVE domain containing 21.
      
 0.416
pinx1
PIN2 (TERF1) interacting telomerase inhibitor 1.
      
 0.409
rnf128
RING-type domain-containing protein.
      
 0.408
ENSPFOP00000017969
Tripartite motif containing 45.
      
 0.407
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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