Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ajap1Adherens junctions associated protein 1. (397 aa)    
Predicted Functional Partners:
poc5
POC5 centriolar protein homolog (Chlamydomonas).
      
 0.684
ppib
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
      
 0.581
ENSPFOP00000004039
Myosin VIIA and Rab interacting protein.
      
 0.546
ENSPFOP00000024145
Uncharacterized protein.
      
 0.537
ENSPFOP00000011015
Myotubularin related protein 11.
      
 0.512
mapk7
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
      
 0.504
ENSPFOP00000004206
EGF-like-domain, multiple 6.
      
 0.498
ENSPFOP00000007586
Si:dkey-280e21.3.
      
 0.498
shtn1
Shootin 1.
      
 0.498
NSG1
Neuronal vesicle trafficking associated 1.
      
 0.484
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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