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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001769Zinc finger and BTB domain containing 7a. (594 aa)    
Predicted Functional Partners:
ENSPFOP00000000686
Adenylate kinase 9.
    
  0.589
ENSPFOP00000005078
BRCA1 associated RING domain 1.
    
  0.589
ENSPFOP00000028219
Uncharacterized protein.
    
  0.588
dclre1b
DNA cross-link repair 1B.
    
 
 0.549
sgk3
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
  0.548
srbd1
S1 RNA binding domain 1.
    
 
 0.548
ENSPFOP00000011847
Nuclear receptor subfamily 2, group C, member 2.
    
 0.542
LOC103154893
Nuclear receptor subfamily 2, group C, member 1.
    
 0.541
YTHDC2
YTH domain containing 2.
    
  0.531
LOC103149820
Forkhead box Q2.
    
 0.521
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.