Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mrps36Mitochondrial ribosomal protein S36. (109 aa)    
Predicted Functional Partners:
dld
Dihydrolipoyl dehydrogenase.
   
 0.989
ENSPFOP00000011710
Mitochondrial ribosomal protein S25.
   
 
 0.983
mrps21
Mitochondrial ribosomal protein S21.
   
 0.982
mrps30
Mitochondrial ribosomal protein S30.
    
 0.976
mrps31
Mitochondrial ribosomal protein S31.
   
 0.975
mrps33
Mitochondrial ribosomal protein S33.
   
 0.974
ENSPFOP00000007169
Mitochondrial ribosomal protein S22.
   
 
 0.973
ENSPFOP00000030063
Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
 0.971
ENSPFOP00000012214
Mitochondrial ribosomal protein S35.
   
 
 0.969
mrps5
Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
     
 0.965
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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