Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
LOC103149137Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (303 aa)    
Predicted Functional Partners:
pot1
Telo_bind domain-containing protein.
    
 0.601
LOC103156947
Uncharacterized protein.
    
 0.486
terb1
Telomere repeat binding bouquet formation protein 1.
    
 
 0.440
ENSPFOP00000003275
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
  0.428
nbn
Nibrin.
    
  0.428
ubxn1
UBX domain protein 1.
      
 0.424
ENSPFOP00000009359
Si:ch211-225b11.4.
      
 0.420
ENSPFOP00000009375
Uncharacterized protein.
      
 0.420
THADA
THADA armadillo repeat containing.
      
 0.420
ENSPFOP00000025497
Uncharacterized protein.
      
 0.420
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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