Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC103155224Aggrecan a. (1480 aa)    
Predicted Functional Partners:
ADAMTS5
ADAM metallopeptidase with thrombospondin type 1 motif 5.
    
 0.924
LOC103154503
Zmp:0000000846.
   
 0.918
LOC103141903
Tenascin C.
   
 0.918
tnr
Tenascin R (restrictin, janusin).
   
 0.899
LOC103145053
Fibromodulin b.
    
 0.769
LOC103144314
Fibromodulin a.
    
 0.769
hapln1
Hyaluronan and proteoglycan link protein 1a.
   
 0.758
LOC103156159
Hyaluronan and proteoglycan link protein 1b.
   
 0.758
prelp
Proline/arginine-rich end leucine-rich repeat protein.
    
 0.752
ENSPFOP00000011961
Mitotic arrest deficient 1 like 1.
    
 
 0.748
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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