STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103155224Aggrecan a. (1480 aa)    
Predicted Functional Partners:
LOC103154503
Zmp:0000000846.
   
 0.853
LOC103141903
Tenascin C.
   
 0.853
tnr
Tenascin R (restrictin, janusin).
   
 0.839
hapln1
Hyaluronan and proteoglycan link protein 1a.
   
0.808
LOC103156159
Hyaluronan and proteoglycan link protein 1b.
   
0.808
tnn
Tenascin N.
   
  0.729
LOC103145053
Fibromodulin b.
     
 0.700
LOC103144314
Fibromodulin a.
     
 0.700
ogn
Osteoglycin, paralog a.
     
 0.674
LOC103155740
Asporin.
     
 0.667
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.