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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnase2Deoxyribonuclease II, lysosomal. (376 aa)    
Predicted Functional Partners:
ENSPFOP00000021185
Uncharacterized protein.
  
  
 
0.886
ENSPFOP00000029119
Deoxyribonuclease II beta.
  
  
 
0.886
LOC103143909
Uncharacterized protein.
  
  
 
0.651
gns
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
   
 0.650
LOC103151749
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
   
 0.650
bloc1s1
Biogenesis of lysosomal organelles complex-1, subunit 1.
   
 
  0.640
ENSPFOP00000016921
AP-1 complex subunit gamma.
     
 0.574
ap1g1
AP-1 complex subunit gamma.
     
 0.574
LOC103146313
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
 
 0.557
ctsz
Cathepsin Z; Belongs to the peptidase C1 family.
   
 
 0.557
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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