Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rpl37Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)    
Predicted Functional Partners:
rpl34
Ribosomal protein L34.
  
 0.999
ENSPFOP00000000526
Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.
  
 0.999
LOC103144500
Ribosomal protein L26.
  
 0.999
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
  
 0.999
ENSPFOP00000001295
Ribosomal protein L10.
   
 0.999
rps26
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 
 0.999
rps8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 
 0.999
rps5
Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
   
 
 0.999
rpl28
Ribosomal protein L28.
   
 0.999
ENSPFOP00000002502
Ribosomal protein S28.
  
 
 0.999
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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