Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SLC25A29Solute carrier family 25 member 29; Belongs to the mitochondrial carrier (TC 2.A.29) family. (330 aa)    
Predicted Functional Partners:
WDR25
WD repeat domain 25.
      
 0.499
LOC103136896
Si:ch211-114c17.1.
      
 0.492
ENSPFOP00000015367
WD repeat domain 20b.
      
 0.473
ENSPFOP00000016266
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
      
 0.471
prpf39
PRP39 pre-mRNA processing factor 39 homolog (yeast).
      
 0.416
ENSPFOP00000003863
Peptidylprolyl isomerase.
      
 0.416
mrps21
Mitochondrial ribosomal protein S21.
      
 0.414
ENSPFOP00000001516
Uncharacterized protein.
      
 0.409
ENSPFOP00000019692
Coactivator-associated arginine methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
      
 0.407
agxt2
Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
      
 0.406
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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