Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001798Polybromo 1. (1571 aa)    
Predicted Functional Partners:
arid2
AT rich interactive domain 2 (ARID, RFX-like).
   
 0.993
brd7
Bromodomain containing 7.
   
 0.981
LOC103133096
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
   
 0.970
SMARCE1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
   
 0.970
ENSPFOP00000015063
Actin-like 6A; Belongs to the actin family.
   
 0.970
LOC103154348
HMG box domain-containing protein.
   
 0.970
phf10
PHD finger protein 10.
    
 0.968
smarca2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.
   
0.966
smarca4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a.
   
0.966
LOC103137716
Uncharacterized protein.
   
0.966
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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