Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ENSPFOP00000001799Histone deacetylase 6. (850 aa)    
Predicted Functional Partners:
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.844
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.844
ENSPFOP00000018093
Cortactin.
   
 0.817
LOC103155772
NME/NM23 family member 8; Belongs to the NDK family.
   
 
 0.811
LOC103140207
Hematopoietic cell-specific Lyn substrate 1.
   
 0.810
ENSPFOP00000015912
WD repeat domain 90.
    
 0.800
sirt2
NAD-dependent protein deacetylase; NAD-dependent protein deacetylase.
   
 0.790
sirt1
Sirtuin 1.
   
 0.789
ranbp2
RAN binding protein 2.
  
 0.784
LOC103154164
Zgc:136908; Belongs to the AAA ATPase family.
   
 0.735
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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