STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001807Family with sequence similarity 168 member A. (230 aa)    
Predicted Functional Partners:
wwp2
E3 ubiquitin-protein ligase.
    
   0.837
wwp1
WW domain containing E3 ubiquitin protein ligase 1.
    
   0.837
polr2c
Polymerase (RNA) II (DNA directed) polypeptide C.
    
   0.765
rc3h1
Ring finger and CCCH-type domains 1b.
    
   0.758
recql5
RecQ helicase-like 5.
    
   0.758
ENSPFOP00000030966
Polymerase (RNA) II (DNA directed) polypeptide G-like.
    
   0.758
polr2d
Polymerase (RNA) II (DNA directed) polypeptide D.
    
   0.753
polr2b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.753
ENSPFOP00000014180
E3 ubiquitin-protein ligase.
    
   0.682
itch
E3 ubiquitin-protein ligase.
    
   0.682
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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