close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001808LHFPL tetraspan subfamily member 4b. (183 aa)    
Predicted Functional Partners:
slc16a5
Solute carrier family 16 member 5a.
      
 0.467
CIB2
Calcium and integrin binding family member 2.
   
 
 0.466
ENSPFOP00000003353
Mtr4 exosome RNA helicase.
      
 0.443
LOC103146059
Calcium and integrin binding family member 3.
   
 
 0.411
cib2
Calcium and integrin binding family member 2.
   
 
 0.411
CDH18
Cadherin 18; Cadherins are calcium-dependent cell adhesion proteins.
   
  0.406
CDH8
Cadherin 8; Cadherins are calcium-dependent cell adhesion proteins.
   
  0.405
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.