Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001817Uncharacterized protein. (676 aa)    
Predicted Functional Partners:
ENSPFOP00000007356
Intersectin 2a.
   
 0.522
ENSPFOP00000011660
Intersectin 2b.
   
 0.522
rhobtb3
Si:dkey-6b12.5.
    
 0.503
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.494
ENSPFOP00000028219
Uncharacterized protein.
    
  0.461
ENSPFOP00000000249
Gamma-glutamylcyclotransferase b.
    
   0.451
LOC103135107
Uncharacterized protein.
    
   0.451
igdcc3
Immunoglobulin superfamily, DCC subclass, member 3.
    
 0.446
ENSPFOP00000003588
DCC netrin 1 receptor.
    
 0.446
DCC
DCC netrin 1 receptor.
    
 0.446
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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