Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MYBPC3Myosin binding protein C, cardiac. (1176 aa)    
Predicted Functional Partners:
ENSPFOP00000009526
WD repeat domain 18.
   
 0.699
ENSPFOP00000002689
Troponin I type 1a (skeletal, slow).
   
 
 0.697
ENSPFOP00000017575
Testis expressed 10.
   
 0.669
LOC103150158
Uncharacterized protein.
   
 0.644
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.641
ENSPFOP00000025998
Myosin, light chain 7, regulatory.
   
 0.636
calm2
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
   
 0.635
calm2-2
Calmodulin.
   
 0.635
ENSPFOP00000013324
annotation not available
   
 0.635
calm2-3
Calmodulin.
   
 0.635
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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