Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSPFOP00000001827Nucleoredoxin like 1. (224 aa)    
Predicted Functional Partners:
C8orf37
Chromosome 8 open reading frame 37.
      
 0.544
ankle1
Zgc:85936.
    
 
 0.543
VSX2
Visual system homeobox 2.
      
 0.535
ENSPFOP00000011593
Ataxin 10.
      
 0.533
LOC103140936
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog a.
   
  
 0.523
LOC103131332
Uncharacterized protein.
   
  
 0.507
ENSPFOP00000002557
Leukotriene C4 synthase.
      
 0.501
med26
TFIIS N-terminal domain-containing protein.
      
 0.499
ENSPFOP00000002877
Uncharacterized protein.
      
 0.499
TNPO2
Transportin 2.
      
 0.499
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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