Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmem170aTransmembrane protein 170A. (137 aa)    
Predicted Functional Partners:
ENSPFOP00000010193
Craniofacial development protein 1; May play a role during embryogenesis.
      
 0.712
mcph1
Microcephalin 1.
      
 0.700
nedd9
Neural precursor cell expressed, developmentally down-regulated 9.
      
 0.669
ENSPFOP00000005979
BCAR1 scaffold protein, Cas family member.
      
 0.669
ndc1
NDC1 transmembrane nucleoporin.
      
 0.665
ENSPFOP00000008380
Si:ch211-233a24.2.
    
   0.585
ENSPFOP00000030689
Uncharacterized protein.
    
   0.585
nup93
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
      
 0.583
ankle2
Ankyrin repeat and LEM domain containing 2.
      
 0.549
ENSPFOP00000004198
Baculoviral IAP repeat containing 6.
      
 0.545
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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