Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103139226Tripartite motif containing 35-28. (472 aa)    
Predicted Functional Partners:
dnlz
DNL-type zinc finger.
      
 0.693
RNF207
Ring finger protein 207.
      
 0.520
LOC103146713
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
      
 0.499
tnfaip3
Tumor necrosis factor, alpha-induced protein 3.
    
 
 0.465
wwox
WW domain containing oxidoreductase.
    
 
 0.463
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 
 0.422
LOC103129449
Uncharacterized protein.
  
 
   0.416
ENSPFOP00000017168
B30.2/SPRY domain-containing protein.
  
 
   0.411
ENSPFOP00000012307
Uncharacterized protein.
  
 
   0.403
DDX41
DEAD-box helicase 41.
    
  0.401
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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