Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sigmar1Sigma non-opioid intracellular receptor 1. (222 aa)    
Predicted Functional Partners:
LOC103136915
Phosphoethanolamine methyltransferase.
   
 0.985
sc5d
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 0.984
ENSPFOP00000007132
Cytochrome P450, family 51; Belongs to the cytochrome P450 family.
   
 
 0.968
sqle
Squalene epoxidase a.
   
 
 0.967
ERG28
Ergosterol biosynthesis 28 homolog.
   
 
 0.963
ENSPFOP00000007177
7-dehydrocholesterol reductase.
   
 
 0.933
tm7sf2
Transmembrane 7 superfamily member 2.
   
 
 0.933
ch25h
Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family.
   
 0.901
ENSPFOP00000003559
Cholesterol 25-hydroxylase like 1, tandem duplicate 1; Belongs to the sterol desaturase family.
   
 0.901
ENSPFOP00000005693
Fatty acid hydroxylase domain containing 2; Belongs to the sterol desaturase family.
   
 0.901
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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