Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103152677Uncharacterized protein. (312 aa)    
Predicted Functional Partners:
LOC103155071
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.640
ranbp2
RAN binding protein 2.
   
 0.632
ENSPFOP00000015006
Intraflagellar transport 140 homolog (Chlamydomonas).
   
 0.621
NEK9
NIMA related kinase 9.
  
  0.617
mysm1
Myb-like, SWIRM and MPN domains 1.
   
 0.601
ENSPFOP00000011961
Mitotic arrest deficient 1 like 1.
    
 0.574
ENSPFOP00000017575
Testis expressed 10.
   
 0.565
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.561
ENSPFOP00000015912
WD repeat domain 90.
    
  0.553
atic
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
    
 0.545
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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