close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001871Homeobox C5a. (224 aa)    
Predicted Functional Partners:
hoxc4
Homeobox C4a.
   
 
0.953
hoxc6
Homeobox C6a.
   
  
0.953
LOC103145271
Homeobox A4.
  
 
0.873
ENSPFOP00000010092
Uncharacterized protein.
   
 
0.869
HOXA7
Homeobox A7.
   
 
0.758
ENSPFOP00000014027
Homeobox D4a.
   
  
0.752
ENSPFOP00000001861
Homeobox B4a.
   
  
0.739
LOC103155863
Homeobox domain-containing protein.
   
 
0.669
HOXB6
Homeobox B6.
   
 
0.669
ENSPFOP00000018267
Homeobox B5b.
  
  
0.656
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.