Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC103156700Neuronal pentraxin IIb. (300 aa)    
Predicted Functional Partners:
ENSPFOP00000000605
Ring finger protein 2.
    
 0.734
RING1
Ring finger protein 1.
    
 0.734
p2rx5
P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.
      
 0.693
ENSPFOP00000009820
Hypocretin (orexin) receptor 2.
      
 0.678
ENSPFOP00000017160
Uncharacterized protein.
      
 0.626
eed
Embryonic ectoderm development.
    
 0.624
ENSPFOP00000005927
Neuronal pentraxin receptor a.
   
   0.603
opa1
OPA1 mitochondrial dynamin like GTPase; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
   0.538
nit2
Nitrilase family, member 2.
    
   0.504
PCGF3
Polycomb group ring finger 3.
    
  0.489
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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