Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
atad2bATPase family AAA domain containing 2B. (1445 aa)    
Predicted Functional Partners:
ENSPFOP00000024571
Glycerol-3-phosphate dehydrogenase 2 (mitochondrial).
  
 0.875
supt16h
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 
 0.819
ssrp1
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
   
 
 0.796
cecr2
Bromo domain-containing protein.
   
 
 0.786
psmd6
Proteasome 26S subunit, non-ATPase 6.
   
 0.784
wdr76
WD repeat-containing protein 76; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. Belongs to the WD repeat DDB2/WDR76 family.
   
 
 0.777
mysm1
Myb-like, SWIRM and MPN domains 1.
   
 0.769
ENSPFOP00000013373
Proteasome 26S subunit, non-ATPase 12.
   
 0.767
psmd13
Proteasome 26S subunit, non-ATPase 13.
   
 0.764
ENSPFOP00000011703
Proteasome 26S subunit, non-ATPase 8.
   
 0.761
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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