Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
apehZgc:136971. (711 aa)    
Predicted Functional Partners:
ist1
IST1 factor associated with ESCRT-III.
    
   0.863
prep
Prolyl endopeptidase.
   
 
 0.717
ENSPFOP00000002039
Solute carrier family 25 member 42; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.687
tsc2
TSC complex subunit 2.
      
 0.676
dpp3
Dipeptidyl peptidase 3; Belongs to the peptidase M49 family.
   
 
 0.623
LOC103154994
Uncharacterized protein.
   
 
 0.620
ENSPFOP00000005984
Ring finger protein 123.
   
  
 0.606
ENSPFOP00000018326
Charged multivesicular body protein 2A.
   
 
 0.602
LOC103136057
Galectin.
    
   0.548
LGALS8
Galectin.
    
   0.548
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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