Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hoxc6Homeobox C6a. (236 aa)    
Predicted Functional Partners:
hoxc9
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
   
 
 0.949
ENSPFOP00000001871
Homeobox C5a.
   
 
 0.941
hoxc4
Homeobox C4a.
   
 
 0.830
ENSPFOP00000010092
Uncharacterized protein.
   
 
 0.830
LOC103145271
Homeobox A4.
   
 
 0.830
HOXA7
Homeobox A7.
   
   0.829
ENSPFOP00000014027
Homeobox D4a.
   
 
 0.818
ENSPFOP00000001861
Homeobox B4a.
   
 
 0.775
egr2
Early growth response 2b.
    
 
 0.719
PANX
Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family.
      
 0.709
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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