Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001899MARVEL domain containing 1. (168 aa)    
Predicted Functional Partners:
slf1
SMC5-SMC6 complex localization factor 1.
      
 0.686
actr8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
      
 0.669
ENSPFOP00000014735
TEL2, telomere maintenance 2, homolog (S. cerevisiae).
      
 0.663
LOC103142161
Reprimo-like.
      
 0.639
PDZD4
PDZ domain containing 4.
      
 0.560
ENSPFOP00000004810
Von Willebrand factor C domain containing 2 like.
      
 0.554
rabac1
PRA1 family protein.
      
 0.549
gas2
Growth arrest-specific 2a.
   
  
 0.499
ENSPFOP00000001798
Polybromo 1.
      
 0.498
hus1
Checkpoint protein; Belongs to the HUS1 family.
      
 0.498
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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