STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103146942Uncharacterized protein. (406 aa)    
Predicted Functional Partners:
ENSPFOP00000020679
Bradykinin receptor B1; Belongs to the G-protein coupled receptor 1 family.
    
 0.901
LOC103156966
Cytochrome c-1.
    
 0.820
c1qbp
Complement component 1, q subcomponent binding protein.
    
 0.793
ndufa5
NADH:ubiquinone oxidoreductase subunit A5.
    
 
 0.769
ndufa9
NADH:ubiquinone oxidoreductase subunit A9a.
  
   0.758
ENSPFOP00000005307
Peptidase (mitochondrial processing) alpha.
    
 
 0.757
LOC103135126
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
    
  0.757
ndufs4
NADH:ubiquinone oxidoreductase subunit S4.
    
 
 0.749
ndufa6
NADH:ubiquinone oxidoreductase subunit A6; Belongs to the complex I LYR family.
    
   0.747
ndufv2
NADH:ubiquinone oxidoreductase core subunit V2.
   
   0.747
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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