Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
arhgef11Rho guanine nucleotide exchange factor (GEF) 11. (1460 aa)    
Predicted Functional Partners:
LOC103151262
Uncharacterized protein.
    
 0.984
LOC103149245
Guanine nucleotide binding protein (G protein), alpha 13b.
    
 0.984
ENSPFOP00000027974
Uncharacterized protein.
    
 0.984
LOC103154003
Uncharacterized protein.
   
 0.976
LOC103149604
Uncharacterized protein.
   
 0.976
LOC103149647
Uncharacterized protein.
   
 0.976
LOC103134577
Ras homolog family member Ca.
   
 0.976
LOC103154239
Uncharacterized protein.
   
 0.976
LOC103138302
Uncharacterized protein.
   
 0.976
arhgef12
Rho guanine nucleotide exchange factor (GEF) 12a.
     
 
0.920
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
Server load: low (22%) [HD]