hoxc8 protein (Poecilia formosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

hoxc8

Homeobox C10a. (396 aa)

Predicted Functional Partners:

LOC103134318

0.766

LOC103152427

0.547

pbx1

0.547

pbx3

0.547

pbx4

0.547

LOC103143038

0.547

hoxd3

0.511

ENSPFOP00000014027

0.490

hoxa10

0.489

ENSPFOP00000003666

0.468

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000003666	LOC103143038	ENSPFOP00000003666	ENSPFOP00000028067	Homeobox A11b.	Pre-B-cell leukemia homeobox 1a.	0.547
ENSPFOP00000003666	LOC103152427	ENSPFOP00000003666	ENSPFOP00000001955	Homeobox A11b.	Pre-B-cell leukemia homeobox 2.	0.547
ENSPFOP00000003666	hoxc8	ENSPFOP00000003666	ENSPFOP00000001913	Homeobox A11b.	Homeobox C10a.	0.468
ENSPFOP00000003666	pbx1	ENSPFOP00000003666	ENSPFOP00000016389	Homeobox A11b.	Homeobox domain-containing protein.	0.547
ENSPFOP00000003666	pbx3	ENSPFOP00000003666	ENSPFOP00000017446	Homeobox A11b.	Homeobox domain-containing protein.	0.547
ENSPFOP00000003666	pbx4	ENSPFOP00000003666	ENSPFOP00000021162	Homeobox A11b.	Pre-B-cell leukemia transcription factor 4.	0.547
ENSPFOP00000014027	LOC103134318	ENSPFOP00000014027	ENSPFOP00000030711	Homeobox D4a.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.576
ENSPFOP00000014027	LOC103143038	ENSPFOP00000014027	ENSPFOP00000028067	Homeobox D4a.	Pre-B-cell leukemia homeobox 1a.	0.523
ENSPFOP00000014027	LOC103152427	ENSPFOP00000014027	ENSPFOP00000001955	Homeobox D4a.	Pre-B-cell leukemia homeobox 2.	0.523
ENSPFOP00000014027	hoxc8	ENSPFOP00000014027	ENSPFOP00000001913	Homeobox D4a.	Homeobox C10a.	0.490
ENSPFOP00000014027	hoxd3	ENSPFOP00000014027	ENSPFOP00000014051	Homeobox D4a.	Homeobox D3a.	0.999
ENSPFOP00000014027	pbx1	ENSPFOP00000014027	ENSPFOP00000016389	Homeobox D4a.	Homeobox domain-containing protein.	0.523
ENSPFOP00000014027	pbx3	ENSPFOP00000014027	ENSPFOP00000017446	Homeobox D4a.	Homeobox domain-containing protein.	0.523
ENSPFOP00000014027	pbx4	ENSPFOP00000014027	ENSPFOP00000021162	Homeobox D4a.	Pre-B-cell leukemia transcription factor 4.	0.523
LOC103134318	ENSPFOP00000014027	ENSPFOP00000030711	ENSPFOP00000014027	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Homeobox D4a.	0.576
LOC103134318	LOC103143038	ENSPFOP00000030711	ENSPFOP00000028067	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Pre-B-cell leukemia homeobox 1a.	0.547
LOC103134318	LOC103152427	ENSPFOP00000030711	ENSPFOP00000001955	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Pre-B-cell leukemia homeobox 2.	0.547
LOC103134318	hoxc8	ENSPFOP00000030711	ENSPFOP00000001913	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Homeobox C10a.	0.766
LOC103134318	hoxd3	ENSPFOP00000030711	ENSPFOP00000014051	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Homeobox D3a.	0.607
LOC103134318	pbx1	ENSPFOP00000030711	ENSPFOP00000016389	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Homeobox domain-containing protein.	0.547