Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSPFOP00000001918Ventral anterior homeobox 1. (295 aa)    
Predicted Functional Partners:
ipo13
Importin 13.
    
 
 0.719
LOC103155772
NME/NM23 family member 8; Belongs to the NDK family.
    
   0.643
ENSPFOP00000011279
Forkhead box G1a.
   
 0.590
ENSPFOP00000017823
Fork-head domain-containing protein.
   
 0.590
LOC103140457
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 
 0.586
ENSPFOP00000015912
WD repeat domain 90.
    
   0.554
ENSPFOP00000020997
Fork-head domain-containing protein.
   
 0.544
LOC103140005
Si:ch73-182a11.2.
    
 
 0.499
LOC103150493
LIM-domain binding 1b.
    
 0.478
LOC103152234
LIM domain binding 1a.
    
 0.478
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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