Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmem260Transmembrane protein 260. (687 aa)    
Predicted Functional Partners:
aurkaip1
Aurora kinase A interacting protein 1.
      
 0.770
ENSPFOP00000018079
Nonhomologous end-joining factor 1.
      
 0.716
LOC103130411
Uncharacterized protein.
      
 0.675
LOC103141290
Zgc:100829.
      
 0.650
ENSPFOP00000031165
Uncharacterized protein.
      
 0.650
mst1r
Macrophage stimulating 1 receptor b.
      
 0.636
sult4a1
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.560
srp54
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
      
 0.550
ENSPFOP00000011705
AP-1 complex subunit gamma.
      
 0.550
bcl2l12
Si:ch73-248e21.1.
      
 0.546
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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