Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001921Tropomodulin 4 (muscle). (341 aa)    
Predicted Functional Partners:
ENSPFOP00000017899
Tropomodulin 2.
  
  
 
0.956
tmod1
Tropomodulin 1.
  
  
 
0.901
LOC103139840
Scinderin like a.
    
 
 0.846
LOC103149535
Scinderin like b.
    
 
 0.846
ENSPFOP00000006745
FLII actin remodeling protein.
    
 
 0.775
ENSPFOP00000022533
Uncharacterized protein.
    
 
 0.775
myl1
Myosin, light chain 1, alkali; skeletal, fast.
   
 
 0.755
LOC103153232
Tropomyosin 2 (beta); Belongs to the tropomyosin family.
   
 0.719
TPM1
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.703
LOC103149890
Uncharacterized protein; Belongs to the tropomyosin family.
   
 0.703
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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