Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103152277Family with sequence similarity 8 member A1b. (332 aa)    
Predicted Functional Partners:
ENSPFOP00000012320
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
 
 0.897
ENSPFOP00000012451
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
 
 0.897
syvn1
Synovial apoptosis inhibitor 1, synoviolin.
    
 
 0.797
amfr
Autocrine motility factor receptor b.
    
 
 0.797
pithd1
PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1.
      
 0.709
LOC103147664
OS9 endoplasmic reticulum lectin.
    
 
 0.700
erlec1
Endoplasmic reticulum lectin 1.
    
 
 0.700
LOC103151209
FRA10A associated CGG repeat 1.
      
 0.692
fam136a
Family with sequence similarity 136 member A.
      
 0.688
ENSPFOP00000010688
Uncharacterized protein.
      
 0.644
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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