Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001934MARVEL domain-containing protein. (249 aa)    
Predicted Functional Partners:
vamp2
Vesicle-associated membrane protein 2.
   
 0.810
ENSPFOP00000009016
Vesicle-associated membrane protein 1.
   
 0.763
ENSPFOP00000013727
Zgc:92912.
   
 0.763
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.687
LOC103149866
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.687
cd248
Uncharacterized protein.
      
 0.583
zfp36l1
Zinc finger protein 36, C3H type-like 1a.
      
 0.582
acbd3
Acyl-Coenzyme A binding domain containing 3.
      
 0.581
VAMP3
Vesicle associated membrane protein 3.
   
 0.559
ENSPFOP00000011917
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.533
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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