STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103141106Homeobox C12a. (279 aa)    
Predicted Functional Partners:
hand2
Heart and neural crest derivatives expressed 2.
    
 
 0.702
taf10
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
      
 0.673
ezh2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
    
 
 0.584
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
    
 
 0.584
ENSPFOP00000001253
Uncharacterized protein.
      
 0.553
pdhx
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 
 0.549
LOC103145767-2
Musculoskeletal, embryonic nuclear protein 1b.
      
 0.531
ENSPFOP00000004048
Urotensin 2, alpha.
      
 0.500
cnbp
CCHC-type zinc finger, nucleic acid binding protein a.
      
 0.498
ENSPFOP00000010659
Mahogunin, ring finger 1b.
      
 0.486
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.