close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103141106Homeobox C12a. (279 aa)    
Predicted Functional Partners:
ENSPFOP00000004048
Urotensin 2, alpha.
      
 0.586
LOC103145767-2
Musculoskeletal, embryonic nuclear protein 1b.
      
 0.586
LOC103152427
Pre-B-cell leukemia homeobox 2.
    
 
 0.547
pbx1
Homeobox domain-containing protein.
    
 
 0.547
pbx3
Homeobox domain-containing protein.
    
 
 0.547
pbx4
Pre-B-cell leukemia transcription factor 4.
    
 
 0.547
LOC103143038
Pre-B-cell leukemia homeobox 1a.
    
 
 0.547
ppard
Peroxisome proliferator-activated receptor delta b.
    
 
 0.514
ENSPFOP00000010659
Mahogunin, ring finger 1b.
      
 0.477
hoxc6
Homeobox C6a.
    
 
0.435
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.