Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001946Rap guanine nucleotide exchange factor (GEF) 5a. (408 aa)    
Predicted Functional Partners:
ENSPFOP00000008817
Uncharacterized protein.
    
 
 0.681
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 
 0.681
mras
Muscle RAS oncogene homolog.
    
 0.670
ENSPFOP00000001087
Uncharacterized protein.
    
 0.587
rap1a
RAP1A, member of RAS oncogene family b.
    
 0.587
LOC103139095
RAP1A, member of RAS oncogene family a.
    
 0.587
ENSPFOP00000012874
annotation not available
    
 0.587
slc35c1
Solute carrier family 35 member C1.
      
 0.582
ENSPFOP00000023906
Rap guanine nucleotide exchange factor (GEF)-like 1.
    
 
 0.576
adam23
ADAM metallopeptidase domain 23.
      
 0.568
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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