Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103146963RING-type domain-containing protein. (476 aa)    
Predicted Functional Partners:
MSL3
MSL complex subunit 3.
    
 0.996
msl1
MSL complex subunit 1b.
    
 0.995
kat5
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.927
ENSPFOP00000019737
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.927
dhx9
DRBM domain-containing protein.
    
 
 0.897
kat6a
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.849
LOC103152602
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.849
kat6b
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.849
ENSPFOP00000014018
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.849
LOC103146179
MRG domain-containing protein.
    
 0.811
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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