Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001949Versican a. (1187 aa)    
Predicted Functional Partners:
LOC103154503
Zmp:0000000846.
   
 0.864
LOC103141903
Tenascin C.
   
 0.864
tnr
Tenascin R (restrictin, janusin).
   
 0.763
hps5
Hermansky-Pudlak syndrome 5 protein homolog; May regulate the synthesis and function of lysosomes and of highly specialized organelles, such as melanosomes and platelet dense granules.
      
 0.715
ENSPFOP00000001578
FERM domain-containing protein.
      
 0.711
ggcx
Gamma-glutamyl carboxylase.
      
 0.709
ADAMTS5
ADAM metallopeptidase with thrombospondin type 1 motif 5.
    
 0.659
smndc1
Survival motor neuron domain containing 1.
      
 0.640
ENSPFOP00000005764
Zgc:152904.
   
 0.615
ENSPFOP00000006069
Neural cell adhesion molecule 1b.
   
 0.615
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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