STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001950Calponin-homology (CH) domain-containing protein. (1606 aa)    
Predicted Functional Partners:
ENSPFOP00000008660
Dynein, axonemal, intermediate chain 1, paralog 2.
   
  
 0.775
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
   
 0.715
ENSPFOP00000006192
Sperm associated antigen 6.
   
 0.704
ENSPFOP00000000035
Uncharacterized protein.
   
 
 0.699
ENSPFOP00000018844
Uncharacterized protein.
   
 
 0.667
ENSPFOP00000000686
Adenylate kinase 9.
   
  0.641
lrrc40
Leucine rich repeat containing 40.
    
 0.620
ENSPFOP00000023483
Uncharacterized protein.
  
 0.617
ENSPFOP00000005078
BRCA1 associated RING domain 1.
    
  0.589
ENSPFOP00000028219
Uncharacterized protein.
    
  0.588
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.