Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001959Si:ch211-150g13.3. (294 aa)    
Predicted Functional Partners:
ENSPFOP00000000489
Synuclein, alpha interacting protein.
      
 0.659
ppp1r9a
Protein phosphatase 1, regulatory subunit 9A.
      
 0.548
ENSPFOP00000009024
Caprin family member 2.
      
 0.499
chsy1
Hexosyltransferase.
      
 0.497
STX19
Syntaxin 19.
      
 0.490
LOC103154403
BCL2 interacting protein 3 like b.
      
 0.415
LOC103146370
BCL2 interacting protein 3 like a.
      
 0.415
ENSPFOP00000001665
Leucine zipper and CTNNBIP1 domain containing.
      
 0.408
yipf4
Protein YIPF.
      
 0.406
ENSPFOP00000018978
Beta-1,4-N-acetylgalactosaminyltransferase; Transfers N-acetylgalactosamine (GalNAc) from UDP-GalNAc to N-acetylglucosamine-beta-benzyl with a beta-1,4-linkage to form N,N'- diacetyllactosediamine, GalNAc-beta-1,4-GlcNAc structures in N-linked glycans and probably O-linked glycans.
      
 0.406
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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