Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
klhl20Kelch-like family member 20. (609 aa)    
Predicted Functional Partners:
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.979
ENSPFOP00000010423
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.979
LOC103141000
Coronin; Belongs to the WD repeat coronin family.
    
 
 0.948
sqstm1
Sequestosome 1.
    
 0.906
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.880
klhl26
Kelch-like family member 26.
    
  0.830
nudcd3
NudC domain containing 3.
   
 
 0.802
ivns1abp
Influenza virus NS1A binding protein a.
    
 0.802
fbxl17
F-box and leucine-rich repeat protein 17.
    
  0.799
ENSPFOP00000008135
BZIP domain-containing protein.
    
 0.798
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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